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27.06.2022 17:14:41
Lecture: 5.04.4528 Computational Biophysics - Details
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General information

Course name Lecture: 5.04.4528 Computational Biophysics
Course number 5.04.4528
Semester Sommersemester 2022
Current number of participants 3
Home institute Institute of Physics
Courses type Lecture in category Teaching
Next date Wed., 29.06.2022 12:15 - 13:45, Room: W02 2-249
Type/Form V
Pre-requisites Knowledge of basic Physics courses (classical mechanics, electrodynamics, statistical mechanics, introductory quantum mechanics). Some knowledge of Linux operating system and scripting luangages (Python, and/or Tcl). Knowledge of data-analysis programs (Excel, Origin, xmgrace) is recommended.
Lehrsprache englisch
ECTS points 3

Course location / Course dates

W02 2-249 Wed.. 12:15 - 13:45 (11x)
W03 2-240 Wed.. 12:15 - 13:45 (2x)
n.a. Wednesday: 12:15 - 13:45, weekly(1x)


The course will explore physical models and computational approaches used for the simulations of macromolecular systems. A mixture of lectures and hands-on tutorials will serve to provide a roadmap for setting investigations of macro-molecular structure and dynamics at the atomic level of detail. The course is based on practical exercises with the biophysical programs NAMD and VMD. In particular, the case studies of various biological systems will be discussed. Relevant physical concepts, mathematical techniques, and computational methods will be introduced, including force fields and algorithms used in molecular modeling and molecular dynamics on parallel computers